Blackshaw, S., Harpavat, S., Trimarchi, J., Cai, L., Huang, H., Kuo, W. P., Fraioli, R. E., Cho, S.-H., Yung, R., Asch, E., Wong, W. H., and Cepko, C. L. (2004) Genomic analysis of mouse retinal development. PLoS Biology,Jun 29;2(9):E247. [PDF]

Cai, L., Huang, H., Blackshaw, S., Liu, J. S., Cepko, C. L., and Wong, W. H. (2004) Cluster Analysis of SAGE data: A Poisson Approach. Genome Biology, 5(7):R51. Epub 2004 Jun 29. [PDF]

Blackshaw, S., Kuo, W. P., Park, P. J., Tsujikawa, M., Gunnersen, J. M., Scott, H. S., Wee- Boon, M., Tan, S. S., and Cepko, C. L. (2003) MicroSAGE is highly representative and reproducible, but reveals major differences in gene expression between samples obtained from identical tissues. Genome Biology, 4:R17. [PDF]

Blackshaw, S. and Livesey, F. J. (2002). Applying genomic technologies to neural development. Current Opinion in Neurobiology, 6:110-14. [PDF]

Browne, S. J., Sullivan, L. S., Blanton, S. H., Cepko, C. L., Blackshaw, S., Birch, D. G., Hughbanks-Wheaton, D., Heckenlively, J. R., and Daiger, S. P. (2002). Mutations in the inosine monophosphate dehydrogenase 1 gene (IMPDH1) cause the RP10 form of autosomal dominant retinitis pigmentosa. Hum. Mol. Genet., 11(5):559-568. [PDF]

Sharon, D*., Blackshaw, S*. Cepko, C. L., and Dryja, T. P. (2002). Profile of the genes expressed in the human peripheral retina, macula, and retinal pigment epithelium determined through serial analysis of gene expression (SAGE). Proc. Natl. Acad. Sci. USA 99:315-20 (* indicates equal contribution by both authors). [PDF]

Blackshaw, S., Fraioli, R. E., Furukawa, T., and Cepko, C. L. (2001). Comprehensive analysis of photoreceptor gene expression and the identification of candidate retinal disease genes. Cell, 107: 579-89. [PDF]